https://www.chemdata.nist.gov/dokuwiki/ 2026-05-11T06:53:40+00:00 https://www.chemdata.nist.gov/dokuwiki/ https://www.chemdata.nist.gov/dokuwiki/lib/tpl/dokuwiki/images/favicon.ico text/html 2023-10-11T16:13:31+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:amdis&rev=1697055211&do=diff AMDIS - Automated Mass spectral Deconvolution and Identification System was developed as a tool to specifically allow gas-chromatography with mass spectral analysis (GC/MS) to be performed during confidential inspections under the Chemical Weapons Convention. It’s real value for most users in automating the complex process of extracting data from GC/MS data file. text/html 2014-03-11T17:57:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:amdis_overview&rev=1394575020&do=diff An Overview of Automated GC/MS Identification by Steve Stein Background Gas chromatography/mass spectrometry, GC/MS, has long been the method of choice for identifying volatile compounds in complex mixtures. This method can fail, however, when acquired spectra are text/html 2014-03-11T17:47:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:amdisexplained&rev=1394574420&do=diff Automated Mass Spectral Deconvolution & Identification System With the support of the Defense Threat Reduction Agency (DoD), AMDIS was developed at NIST for the critical task of verifying a major international treaty, the Chemical Weapons Convention. After more than two years of development as well as very extensive testing, it is now made available to the general analytical chemistry community. text/html 2020-06-29T15:33:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:arus&rev=1593459180&do=diff Annotated Recurrent Unidentified Spectra (ARUS ) To assist in the compound identification problem, the NIST Mass Spectrometry Data Center has developed a novel type of mass spectral library, one that includes all recurrent unidentified mass spectra in a material. Unlike traditional spectral libraries, which consist of reference spectra of known compounds derived from neat standards, these libraries are derived from recurring spectra of unknown identity in the target material itself, where spect… text/html 2019-05-31T16:55:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:asms_2019&rev=1559336100&do=diff ASMS 2019 Presentations and Posters Presentations * MetaboPique. A High-Throughput Computational Workflow for Validating, Annotating, and Organizing MS/MS Spectra Derived from Biological Samples. Authors: Tytus D. Mak, Concepcion A. Remoroza, Meghan C. Burke, Stephen E. Stein text/html 2020-06-30T01:08:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:asms_2020&rev=1593493680&do=diff ASMS 2020 Presentations and Posters Presentations * [The Many Forms of NIST 2020 MS Libraries] Author: Stephen E. Stein. Contact: stephen.stein@nist.gov * [Developing a Data Processing Pipeline for Extending a Comprehensive Tandem Mass Spectral Library] Authors: Xiaoyu Yang , Pedatsur Neta, Yuxue Liang, Connie A. Remoroza , Yamil Simón Manso , Kelly H. Telu , Yuri Mirokhin , Dmitrii Tchekhovskoi , Alexey Mayorov , Tytus D. Mak , Lewis Geer, text/html 2014-02-21T18:09:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:bottom_sidebar&rev=1393024140&do=diff ---------- * Wiki Syntax * Practice page * wiki FAQ ---------- text/html 2019-02-26T12:44:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:contact_bar&rev=1551203040&do=diff ---------- * Contact: massspec@nist.gov ---------- text/html 2014-02-21T16:39:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:cssupport&rev=1393018740&do=diff Macros for ChemStation Several macros have been created to add flexibility to the ChemStation library search and NIST Mass Spectral (MS) Search Program v.1.7. Previously, one ChemStation macro (NISTINT.mac) was available with the NIST MS Search Program v.1.6. This macro displays a dialog box with options to create or append files of spectra to be saved for use by the NIST MS Search Program, to switch to the NIST MS Search Program with automatic import of saved spectra, and to copy ChemStation u… text/html 2021-02-28T23:45:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:dart-library&rev=1614573900&do=diff NIST DART-MS Forensics Database Identifier: doi.org/10.18434/mds2-2313 Contact: DARTdata@nist.gov The NIST DART-MS Forensics Database is an evaluated collection of mass spectra for compounds of interest to the forensics community. The spectra were collected using positive ion Direct Analysis in Real-Time (DART) Mass Spectrometry (MS), either by NIST scientists or by contributing agencies as noted per compound. text/html 2022-05-10T11:35:14+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:digitizer&rev=1652196914&do=diff Using the NIST Spectrum Digitizer Program Written by Meng Zhai Chemical and Biochemical Reference Data Division National Institute of Standards and Technology (NIST), Gaithersburg, Maryland For inquiries regarding this program please contact Dr. David Sparkman at ods@csi.com. text/html 2020-03-02T15:59:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:dimedr&rev=1583182740&do=diff DIMEDR - Disparate Metabolomics Data Reassembler In the past decade, the field of LC-MS based metabolomics has transformed from an obscure specialty into a major “-omics” platform for studying metabolic processes and biomolecular characterization. However, as a whole the field is still very fractured, as the nature of the instrumentation and of the information produced by the platform essentially creates incompatible “islands” of datasets. This lack of data coherency results in the inability t… text/html 2024-07-25T13:53:40+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:distributors&rev=1721930020&do=diff The NIST Mass Spectral Libraries Distributors ---------- * [EI] - NIST/EPA/NIH Mass Spectral Library * [Tandem] - NIST Tandem Mass Spectral Library * [RI] - NIST GC Method/Retention Index Library Distributor [EI] [Tandem] [RI] AB SCIEX Pte. Ltd. 500 Old Connecticut Path text/html 2014-02-21T15:41:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:epastarter&rev=1393015260&do=diff EPA Tandem Mass Spectrometry Starter Library of Environmentally Relevant Compounds Library contents: * 686 compounds by in-source fragmentation at multiple energies * 124 compounds by collision cell fragmentation at single energy Data provided by text/html 2014-02-14T18:21:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:epatandem-library&rev=1392420060&do=diff EPA Tandem Mass Spectrometry Starter Library of Environmentally Relevant Compounds Library contents * 686 compounds by in-source fragmentation at multiple energies * 124 compounds by collision cell fragmentation at single energy Data provided by Larry Zintek, EPA-Chicago in cooperation with Waters Instrument Company, Milford, MA. text/html 2025-09-06T10:50:12+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:glycan-library&rev=1757170212&do=diff NIST 17 Glycan Tandem MS Library Web version of the NIST 17 Glycan MS/MS Library The NIST 17 Glycan MS/MS Library contains 16,421 positive and negative ion spectra of 209 glycans (extracted from the NIST 17 Tandem Library). Spectra can be viewed using the MS Search software, downloaded separately. text/html 2019-05-06T13:57:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:glyco_call&rev=1557165420&do=diff Interlaboratory Study on Glycosylation Analysis Overview Laboratories engaged in glycoanalysis were invited to participate in this multi-laboratory study. Two samples were distributed to the laboratories: one original and one modified NIST monoclonal antibody (mAb) Standard Reference Material. Participants used their own method to analyze the glycans and were asked to: text/html 2015-10-08T11:40:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:glycocalc&rev=1444318800&do=diff The NIST Glyco Mass Calculator M. Lorna A. De Leoz and Stephen E. Stein, Mass Spectrometry Data Center The Glyco MS Calculator is a tool to help calculate the masses and elemental compositions of glycoforms (e.g. glycans, glycopeptides) and their common ions. The user inputs the number of residues in the glycan and the program calculates for the masses and elemental composition of the glycan. It also calculates for the derivatized masses, e.g. permethylated or 2-AB labeled, of the glycan. Then… text/html 2024-08-12T09:53:06+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:interpreter&rev=1723470786&do=diff Mass Spectral Interpreter Introduction New Version – March 2023 (v. 3.4.5). Updated mechanisms and their rates for all fragmentation types (EI, Tandem positive and negative mode). This program connects mass spectral peaks to their probable chemical structure origin and can be quickly invoked from the NISTMS program with the F9 key or right mouse button followed by send to MS Interpreter. It also enables the display of isotopic envelopes, chemical formula calculations and other related calculat… text/html 2019-04-02T15:10:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:libraryconversion&rev=1554232200&do=diff Library Conversion Tool Introduction The LIB2NIST converter can convert data From: * HP MS Libraries (with up to 4 structure libraries) * NIST MS user libraries * Text files in .MSP format with structures in MOLfile format * Text files in .SDF format containing both spectra and structures text/html 2016-08-09T14:24:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:ms-search&rev=1470767040&do=diff NIST MS Search Program What's New in the NIST MS Search Program v.2.2 This is a brief list of the new features in MS Search v.2.2 available from distributors with NIST 14. List of features for MS Search v.2.0g can be found here Updates to NIST MS Search Updates to NIST MS Search v.2.2 or v2.0g are available through distributors. Updates to v.2.0f can be downloaded from this site. text/html 2020-03-12T10:58:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:msms-distributors&rev=1584025080&do=diff The NIST Tandem Library and Search Program distributors ---------- Agilent Technologies Life Sciences and Chemical Analysis Group 5301 Stevens Creek Blvd Bldg 53U M/S WI Santa Clara CA 95051 Phone: 800 227 9770 Sales Enquiries: Contact your local Agilent text/html 2023-07-12T15:28:03+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:msms&rev=1689190083&do=diff NIST 23 Tandem Mass Spectral Libraries [NIST 23 Release Flyer] * 51,501 compounds 60% increase over NIST 20! * 2,374,064 tandem spectra with a wide range of fragmentation conditions including positive and negative modes from ion-trap (up to MS4) and ‘beam-type’ collision cells (QTOF, HCD, and QqQ); new spectra acquired at high accuracy and resolution text/html 2014-04-29T16:31:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:msms12&rev=1398803460&do=diff NIST 12 MS/MS Database and Search Program Library Search Software Features * Search for the exact or isotopic precursor mass. * Search for exact fragment ion mass values in NIST EI and MS/MS databases. * Import spectra from instrument data system using standard formats including mzXML, mzData, mgf, msp, dta, pkl, JCAMP, etc. text/html 2014-09-09T16:45:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:msms14&rev=1410295500&do=diff NIST 14 Tandem Database and Search Program Library Search Software Features (v.2.2) * Search for the exact or isotopic precursor mass. * Search for exact fragment ion mass values in NIST EI and MS/MS databases. * Import spectra from instrument data system using standard formats including mzXML, mzData, mgf, msp, dta, pkl, JCAMP, etc. text/html 2014-02-21T15:15:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:newfeaturelist&rev=1393013700&do=diff New Features in NIST MS Search version 2.0g (May 2011 release) What's New in the NIST MS Search Program v.2.0g * Search for the exact mass value in the NIST/EPA/NIH Mass Spectral Databases or any User Database and use of the accurate or exact mass as a search constraint. text/html 2014-09-15T16:45:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:newfeaturelist14&rev=1410813900&do=diff New Features in NIST MS Search version 2.2 (June 2014 release) What's New in the NIST MS Search Program v.2.2 * Use of NIST GC Method/Retention Index Database data (385,872 records for 82,868 compounds, 56,216 of which there are EI spectra) in user spectrum searches. text/html 2025-09-06T11:03:13+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:nist17&rev=1757170993&do=diff NIST Libraries and Software updated Nov 29, 2019 DOI: 10.18434/T4H594 NIST Search Software New software and demo library can be found here: [Download installation program] [Download manual (PDF)] NIST Tandem Mass Spectral Library New release of the NIST Library of Tandem Mass Spectra is now available. Read more... MS Interpreter Ver 3.4 text/html 2025-11-20T09:50:37+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:nistlibs&rev=1763650237&do=diff NIST Libraries and Software DOI: 10.18434/T4H594 NIST Search Software New software and demo library can be found here: [Download installation program] [Download manual (PDF)] NIST Tandem Mass Spectral Library New release of the NIST Library of Tandem Mass Spectra is now available. Read more... MS Interpreter Ver. 3.4.5 text/html 2025-09-26T16:06:22+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:polymersearch&rev=1758917182&do=diff NIST-Polymer Pyrolysis Search The NIST Polymer Pyrolysis Search software and library is an R Shiny search app and associated library. This app is for the identification of polymers by pyrolysis breakdown products. The search app works with Agilent files (*.d) or netcdf (*.cdf) files. The ZIP file contains a “local” version of R with all necessary associated packages. The search app uses an included “local” version of NIST AMDIS software for retention index calibration and calculation as we… text/html 2020-03-04T10:06:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:ri-distributors&rev=1583334360&do=diff GC Method/RI Database and Search Program Distributors ---------- ALPHA-MOS S20 avenue Didier Daurat Immeuble St Exupery 31400 Toulouse France Phone: 33 562 475380 Fax: 33 561 545615 Business Contact: Dr. Hicham Amine – amine@alpha-mos.com text/html 2023-07-09T19:52:25+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:ridatabase&rev=1688946745&do=diff NIST 23 GC Method / Retention Index Library NIST 23 GC Method / Retention Index Database provides retention indices and gas chromatographic conditions for 180,618 compounds, which includes non-polar, semi-polar on polar stationary phases from the literature and NIST laboratories acquired on packed and open tubular columns. It contains over 490 K data points (index values and GC methods) as well as the origin of the data. When available, details of the gas chromatographic method used to obtain t… text/html 2026-04-16T11:10:06+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:sidebar&rev=1776352206&do=diff Mass Spectrometry Data center * Libraries/Tools/Service * Libraries * Tools * Other Products and Services * Interlaboratory Study * Publications * ASMS 2026 (June 2026) * ASMS previous years * Essential Publications and Presentations * Thermochemical data tables ---------- * Peptide Libraries * Software * Download Libraries ---------- * Glycopeptide Libraries * Oligosaccharide Libraries * Human Milk * Mammalian Milk * Antibody Librar… text/html 2016-08-19T16:22:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:srm1950raw&rev=1471638120&do=diff Raw LC-MS/MS Data of Standard Reference Material 1950, Metabolites in Human Plasma Raw data files that were analyzed in writing the paper “Analysis of human plasma metabolites across different liquid chromatography/mass spectrometry platforms: Cross-platform transferable chemical signatures text/html 2026-04-17T09:46:55+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:start&rev=1776433615&do=diff Libraries, Tools, Service This site provides information and access to NIST mass spectral data products. A variety of data products are available, including EI and tandem MS libraries (small molecule and peptide), a GC retention index collection as well as certain freely available, specialized spectral libraries. Freely available data analysis tools include AMDIS (Automated Mass Spectral Deconvolution and Identification System for GC/MS), the Mass Spectrum Interpreter (connects chemical structu… text/html 2014-02-21T16:57:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:thirdpartcompnotes&rev=1393019820&do=diff Third Party MS Software Compatibility Note If both of the following are true: * your MS software searches, creates, or updates User MS libraries in NIST format; * your software contains file NISTDL32.DLL or NISTDL16.DLL which does not have Version information in Properties as displayed by the Windows Explorer (these files were created before Aug 1999); text/html 2016-01-14T10:51:00+00:00 Anonymous (anonymous@undisclosed.example.com) https://www.chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:uri-library&rev=1452786660&do=diff Libraries of Recurrent Unidentified Spectra of Urine-TMS Two libraries of recurrent unidentified spectra and retention indices for derivatized urine components. Libraries are provided in AMDIS format. Library Download and Installation Download Download ReadMe.txt file to your computer: